mtybilly commited on
Commit
55a0fff
·
verified ·
1 Parent(s): a98e19b

Card: base/cot/fewshot splits, add metadata + paper link + usage (supersedes PR)

Browse files
Files changed (1) hide show
  1. README.md +38 -7
README.md CHANGED
@@ -1,4 +1,16 @@
1
  ---
 
 
 
 
 
 
 
 
 
 
 
 
2
  dataset_info:
3
  features:
4
  - name: id
@@ -34,10 +46,6 @@ dataset_info:
34
  configs:
35
  - config_name: default
36
  data_files:
37
- - split: test
38
- path: data/test-*
39
- - split: cb7
40
- path: data/cb7-*
41
  - split: base
42
  path: data/base-*
43
  - split: cot
@@ -46,6 +54,7 @@ configs:
46
  path: data/fewshot-*
47
  ---
48
 
 
49
  # SupraBench
50
 
51
  **SupraBench** is the first benchmark for evaluating large language models on
@@ -75,9 +84,31 @@ domain-adaptive pretraining (DAPT).
75
  | [`SupraBench/EU-PMC`](https://huggingface.co/datasets/SupraBench/EU-PMC) | Text corpus | 16M-token supramolecular corpus for DAPT |
76
  | [`SupraBench/Binding-Affinity`](https://huggingface.co/datasets/SupraBench/Binding-Affinity) | Comprehensive anchor | per-record binding data + host/guest SMILES, 2D, 3D, environment |
77
 
78
- Each task dataset has a `test` split (merged records) and a `cb7` split (the
79
- CB[7] supplement, for add-on evaluation). Each `base`/`fewshot`/`cot` rendering is
80
- tagged by the `prompt_strategy` field.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
81
 
82
  ## Dataset statistics
83
 
 
1
  ---
2
+ license: cc-by-4.0
3
+ task_categories:
4
+ - text-generation
5
+ language:
6
+ - en
7
+ tags:
8
+ - chemistry
9
+ - supramolecular
10
+ - host-guest
11
+ - molecular-recognition
12
+ - llm-benchmark
13
+ pretty_name: 'SupraBench: Binding Affinity Prediction (BAP)'
14
  dataset_info:
15
  features:
16
  - name: id
 
46
  configs:
47
  - config_name: default
48
  data_files:
 
 
 
 
49
  - split: base
50
  path: data/base-*
51
  - split: cot
 
54
  path: data/fewshot-*
55
  ---
56
 
57
+
58
  # SupraBench
59
 
60
  **SupraBench** is the first benchmark for evaluating large language models on
 
84
  | [`SupraBench/EU-PMC`](https://huggingface.co/datasets/SupraBench/EU-PMC) | Text corpus | 16M-token supramolecular corpus for DAPT |
85
  | [`SupraBench/Binding-Affinity`](https://huggingface.co/datasets/SupraBench/Binding-Affinity) | Comprehensive anchor | per-record binding data + host/guest SMILES, 2D, 3D, environment |
86
 
87
+ Each task dataset is partitioned by prompting strategy into three splits:
88
+ `base`, `cot`, and `fewshot` (the strategy is also recorded in the
89
+ `prompt_strategy` column). The CB[7] generalization records are a subset of every
90
+ split and remain identifiable by host name.
91
+
92
+ ## Usage
93
+
94
+ ```python
95
+ from datasets import load_dataset
96
+
97
+ # prompting-strategy split: "base" | "cot" | "fewshot"
98
+ ds = load_dataset("SupraBench/bap", split="cot")
99
+ print(ds[0]["question"]) # fully rendered prompt
100
+ print(ds[0]["answer"]) # reference label
101
+ ```
102
+
103
+ To run the benchmark end-to-end (inference + scoring) see the
104
+ [code repository](https://github.com/Tianyi-Billy-Ma/SupraBench):
105
+
106
+ ```bash
107
+ uv run python src/main.py \
108
+ --task-config configs/tasks/bap_base.yaml \
109
+ --model-config configs/models/openrouter_qwen35_27b.yaml \
110
+ --output-dir outputs/
111
+ ```
112
 
113
  ## Dataset statistics
114