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Feb 10

OmniMoE: An Efficient MoE by Orchestrating Atomic Experts at Scale

Mixture-of-Experts (MoE) architectures are evolving towards finer granularity to improve parameter efficiency. However, existing MoE designs face an inherent trade-off between the granularity of expert specialization and hardware execution efficiency. We propose OmniMoE, a system-algorithm co-designed framework that pushes expert granularity to its logical extreme. OmniMoE introduces vector-level Atomic Experts, enabling scalable routing and execution within a single MoE layer, while retaining a shared dense MLP branch for general-purpose processing. Although this atomic design maximizes capacity, it poses severe challenges for routing complexity and memory access. To address these, OmniMoE adopts a system-algorithm co-design: (i) a Cartesian Product Router that decomposes the massive index space to reduce routing complexity from O(N) to O(sqrt(N)); and (ii) Expert-Centric Scheduling that inverts the execution order to turn scattered, memory-bound lookups into efficient dense matrix operations. Validated on seven benchmarks, OmniMoE (with 1.7B active parameters) achieves 50.9% zero-shot accuracy across seven benchmarks, outperforming coarse-grained (e.g., DeepSeekMoE) and fine-grained (e.g., PEER) baselines. Crucially, OmniMoE reduces inference latency from 73ms to 6.7ms (a 10.9-fold speedup) compared to PEER, demonstrating that massive-scale fine-grained MoE can be fast and accurate. Our code is open-sourced at https://github.com/flash-algo/omni-moe.

HEAPr: Hessian-based Efficient Atomic Expert Pruning in Output Space

Mixture-of-Experts (MoE) architectures in large language models (LLMs) deliver exceptional performance and reduced inference costs compared to dense LLMs. However, their large parameter counts result in prohibitive memory requirements, limiting practical deployment. While existing pruning methods primarily focus on expert-level pruning, this coarse granularity often leads to substantial accuracy degradation. In this work, we introduce HEAPr, a novel pruning algorithm that decomposes experts into smaller, indivisible atomic experts, enabling more precise and flexible atomic expert pruning. To measure the importance of each atomic expert, we leverage second-order information based on principles similar to Optimal Brain Surgeon (OBS) theory. To address the computational and storage challenges posed by second-order information, HEAPr exploits the inherent properties of atomic experts to transform the second-order information from expert parameters into that of atomic expert parameters, and further simplifies it to the second-order information of atomic expert outputs. This approach reduces the space complexity from O(d^4), where d is the model's dimensionality, to O(d^2). HEAPr requires only two forward passes and one backward pass on a small calibration set to compute the importance of atomic experts. Extensive experiments on MoE models, including DeepSeek MoE and Qwen MoE family, demonstrate that HEAPr outperforms existing expert-level pruning methods across a wide range of compression ratios and benchmarks. Specifically, HEAPr achieves nearly lossless compression at compression ratios of 20% ~ 25% in most models, while also reducing FLOPs nearly by 20%. The code can be found at https://github.com/LLIKKE/HEAPr{https://github.com/LLIKKE/HEAPr}.

  • 6 authors
·
Sep 26, 2025