migrate setup.py to pyproject.toml

pyproject.toml

@@ -0,0 +1,55 @@
+[build-system]
+requires = ["setuptools>=64", "wheel"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "MOSAICapp"
+version = "0.1.0"
+description = "MOSAICapp: Application for Mapping of Subjective Accounts into Interpreted Clusters"
+readme = "README.md"
+license = {text = "MIT"}
+requires-python = ">=3.9"
+authors = [
+    {name = "Romy Beauté", email = "r.beaut@sussex.ac.uk"},
+]
+keywords = [
+    "topic modelling",
+    "phenomenology",
+    "consciousness research",
+    "NLP",
+    "BERTopic",
+]
+classifiers = [
+    "Programming Language :: Python :: 3",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+    "Intended Audience :: Science/Research",
+]
+dependencies = [
+    "torch",
+    "streamlit>=1.37",
+    "pandas",
+    "numpy",
+    "nltk",
+    "bertopic",
+    "umap-learn",
+    "hdbscan",
+    "scikit-learn<1.6",
+    "sentence-transformers",
+    "datamapplot",
+    "huggingface_hub>=0.31.0",
+    "matplotlib",
+]
+
+[project.optional-dependencies]
+dev = ["pytest"]
+
+[project.urls]
+Homepage = "https://github.com/romybeaute/MOSAICapp"
+Repository = "https://github.com/romybeaute/MOSAICapp"
+
+[tool.setuptools.packages.find]
+include = ["mosaic_core*"]
+
+[tool.pytest.ini_options]
+testpaths = ["tests"]

setup.py

@@ -1,33 +0,0 @@
-import os
-from setuptools import setup, find_packages
-
-# Helper to read requirements.txt
-def read_requirements():
-    if os.path.exists("requirements.txt"):
-        with open("requirements.txt") as f:
-            return [line.strip() for line in f if line.strip() and not line.startswith("#")]
-    return []
-
-def parse_requirements(filename):
-    with open(filename, 'r') as f:
-        # Read lines, strip whitespace, filter out comments and pip flags
-        return [
-            line.strip() 
-            for line in f 
-            if line.strip() 
-            and not line.startswith('#') 
-            and not line.startswith('-')
-        ]
-
-setup(
-    name="MOSAICapp",
-    version="0.1.0",
-    description="MOSAICapp: Application for Mapping of Subjective Accounts into Interpreted Clusters",
-    author="Romy Beauté",
-    author_email="r.beaut@sussex.ac.uk",
-    url="https://github.com/romybeaute/MOSAICapp",
-    packages=find_packages(),  # find 'mosaic_core' automatically
-    include_package_data=True,
-    install_requires=parse_requirements("requirements.txt"),  # reads requirements.txt
-    python_requires=">=3.9",
-)