3.45 GB

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History: 23 commits

Sbhat2026

Add enzyme-fine-tuned head v2 (Prong B: oxidoreductase/catalytic MF fix)

8d98343 verified 3 days ago

.gitattributes

1.58 kB
Upload go_annotations_fixed.csv with huggingface_hub 4 months ago
baseline_res.pth
Detected Pickle imports (3)
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2",
- "torch.FloatStorage"
What is a pickle import?
40.1 MB
xet

Upload baseline_res.pth with huggingface_hub 4 months ago
go_annotations_fixed.csv

1.19 GB
xet

Upload go_annotations_fixed.csv with huggingface_hub 4 months ago
go_names.json

310 kB
Upload go_names.json with huggingface_hub 4 months ago
improved_per_label_thresholds.json

151 kB
Upload improved_per_label_thresholds.json with huggingface_hub 3 months ago
improved_res.pth
Detected Pickle imports (4)
- "torch.LongStorage",
- "torch.FloatStorage",
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2"
What is a pickle import?
204 MB
xet

Upload improved_res.pth with huggingface_hub 3 months ago
mammal_enriched.pth
Detected Pickle imports (4)
- "torch.FloatStorage",
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2",
- "torch.LongStorage"
What is a pickle import?
338 MB
xet

Upload mammal_enriched.pth with huggingface_hub 2 months ago
mammal_enriched_thresholds.json

714 kB
Upload mammal_enriched_thresholds.json with huggingface_hub 2 months ago
mlb_public_v1.pkl
Detected Pickle imports (6)
- "numpy._core.multiarray._reconstruct",
- "sklearn.preprocessing._label.MultiLabelBinarizer",
- "joblib.numpy_pickle.NumpyArrayWrapper",
- "None.dtype",
- "numpy.dtype",
- "numpy.ndarray"
How to fix it?
212 kB
xet

Upload mlb_public_v1.pkl with huggingface_hub 4 months ago
protfunc_v3.pth
Detected Pickle imports (4)
- "torch.LongStorage",
- "torch.FloatStorage",
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2"
What is a pickle import?
271 MB
xet

Upload protfunc_v3.pth with huggingface_hub 3 months ago
protfunc_v3_fixed.pth
Detected Pickle imports (4)
- "torch.LongStorage",
- "torch._utils._rebuild_tensor_v2",
- "collections.OrderedDict",
- "torch.FloatStorage"
What is a pickle import?
338 MB
xet

Upload protfunc_v3_fixed.pth with huggingface_hub 2 months ago
protfunc_v3_fixed_thresholds.json

151 kB
Upload protfunc_v3_fixed_thresholds.json with huggingface_hub 2 months ago
protfunc_v3_thresholds.json

154 kB
Upload protfunc_v3_thresholds.json with huggingface_hub 3 months ago
supp_res2.pth
Detected Pickle imports (3)
- "collections.OrderedDict",
- "torch._utils._rebuild_tensor_v2",
- "torch.FloatStorage"
What is a pickle import?
44.6 MB
xet

Upload supp_res2.pth with huggingface_hub 2 months ago
unified_35M_v1.pth
Detected Pickle imports (4)
- "collections.OrderedDict",
- "torch.FloatStorage",
- "torch._utils._rebuild_tensor_v2",
- "torch.LongStorage"
What is a pickle import?
340 MB
xet

Upload unified_35M_v1.pth with huggingface_hub 2 months ago
unified_35M_v1_thresholds.json

171 kB
Upload unified_35M_v1_thresholds.json with huggingface_hub 2 months ago
unified_35M_v2_enzyme.pth
Detected Pickle imports (4)
- "torch.FloatStorage",
- "torch.LongStorage",
- "torch._utils._rebuild_tensor_v2",
- "collections.OrderedDict"
What is a pickle import?
340 MB
xet

Add enzyme-fine-tuned head v2 (Prong B: oxidoreductase/catalytic MF fix) 3 days ago
unified_v1.pth
Detected Pickle imports (4)
- "collections.OrderedDict",
- "torch.FloatStorage",
- "torch._utils._rebuild_tensor_v2",
- "torch.LongStorage"
What is a pickle import?
338 MB
xet

unified_v1: ins CAFA=0.9555 mam CAFA=0.2908 2 months ago
unified_v1_recalibrated.json

722 kB
Add unified_v1_recalibrated.json (T=3.85, precision-tuned, median thresh=0.68) 2 months ago
unified_v1_thresholds.json

144 kB
unified_v1 thresholds 2 months ago

Detected Pickle imports (3)

Detected Pickle imports (4)

Detected Pickle imports (4)

Detected Pickle imports (6)

Detected Pickle imports (4)

Detected Pickle imports (4)

Detected Pickle imports (3)

Detected Pickle imports (4)

Detected Pickle imports (4)

Detected Pickle imports (4)