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ctheodoris
/
Geneformer
like
286
Fill-Mask
Transformers
Safetensors
ctheodoris/Genecorpus-30M
bert
single-cell
genomics
License:
apache-2.0
Model card
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Geneformer
3.58 GB
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20 contributors
History:
244 commits
ctheodoris
update readme citations
fcd26c4
verified
8 days ago
Geneformer-V1-10M
add V2 models
10 months ago
Geneformer-V2-104M
add V2 models
10 months ago
Geneformer-V2-104M_CLcancer
add V2 models
10 months ago
Geneformer-V2-316M
add V2 models
10 months ago
docs
edit docs to remove backend isp functions
10 months ago
examples
delete first version of dist multitask example
10 months ago
fine_tuned_models
add V2 models
10 months ago
geneformer
Update geneformer/mtl/train.py (#582)
about 2 months ago
.gitattributes
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1.27 kB
precommit formatting
over 1 year ago
.gitignore
3.08 kB
Add gitignore file
almost 3 years ago
.pre-commit-config.yaml
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737 Bytes
Add pre-commit config
over 2 years ago
.readthedocs.yaml
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396 Bytes
update readthedocs.yaml
about 2 years ago
MANIFEST.in
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482 Bytes
add option for relabeling data from prior label class dict, update dict paths in manifest
10 months ago
README.md
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9.3 kB
update readme citations
8 days ago
config.json
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591 Bytes
update with V2 models
10 months ago
generation_config.json
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90 Bytes
update with V2 models
10 months ago
model.safetensors
Safe
1.27 GB
xet
update with V2 models
10 months ago
requirements.txt
Safe
382 Bytes
specify bitsandbites version
10 months ago
setup.py
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1.09 kB
update with V2 models
10 months ago
training_args.bin
pickle
Detected Pickle imports (9)
"transformers.trainer_utils.SchedulerType"
,
"transformers.trainer_utils.HubStrategy"
,
"accelerate.state.PartialState"
,
"transformers.trainer_utils.IntervalStrategy"
,
"transformers.trainer_pt_utils.AcceleratorConfig"
,
"transformers.training_args.TrainingArguments"
,
"accelerate.utils.dataclasses.DistributedType"
,
"torch.device"
,
"transformers.training_args.OptimizerNames"
How to fix it?
5.43 kB
xet
update with V2 models
10 months ago