Dataset Viewer
Auto-converted to Parquet Duplicate
proteinbase_id
string
source_row_index
int64
binder_name
string
target
string
binding_strength
null
label
int64
value
null
max_similarity_to_any_database
float64
design_class
string
antibody
bool
target_sequence
string
binder_sequence
string
af2_model_name
string
af3_model_name
string
af2_complex_plddt
float64
af2_ptm
float64
af2_iptm
float64
af2_pae
float64
af2_ipae
float64
af2_min_ipae
float64
af3_ptm
float64
af3_iptm
float64
af3_chain_A_plddt
float64
af3_chain_A_pae
float64
af3_chain_A_ptm
float64
af3_chain_A_iptm
float64
af3_chain_B_plddt
float64
af3_chain_B_pae
float64
af3_chain_B_ptm
float64
af3_chain_B_iptm
float64
af3_iptm_A_B
float64
status
string
error
null
soft-wolf-wave
0
surabhi.lata-Design_02
egfr
null
0
null
24.7
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
YTKEEVIEALKRAIEEAEKALEELPKNPTLGAALICDAALIAIDAAYLVEEALGEEFKELAEKLREAALEALEAVKAGDLEKAKEYLEKAKEIAKEILKKI
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7761
0.3517
0.135
0.8223
0.94
0.7011
0.283947
0.118108
41.180441
25.059812
0.302753
0.118108
77.320944
2.271283
0.855505
0.118108
0.118108
ok
null
azure-vole-ember
1
theraven-sequence47
egfr
null
0
null
25.3
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELQTKALEAKYKAAELLAKGDELYKEAPKSKEAADKAGEAYIKAFEFYAKSLEYRAHYEALS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5539
0.3614
0.1252
0.8605
0.9405
0.7221
0.280722
0.105464
41.791341
24.740756
0.293626
0.105464
61.686727
4.505772
0.621513
0.105464
0.105464
ok
null
strong-lion-snow
2
theraven-sequence46
egfr
null
0
null
21.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELKTKALEAKYKAAELLAKGDELYKEAPKSKEAADKAGEAYIKAFEFYAKSLEYRAHYEALS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5638
0.3605
0.1258
0.8606
0.9411
0.7166
0.270673
0.105061
41.612606
24.914915
0.282655
0.105061
62.96561
4.302436
0.629929
0.105061
0.105061
ok
null
deep-falcon-stone
3
blyncha-sequence42
egfr
null
0
null
27.2
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEEARENGRRDGEKLAEAAAKDPEKLKELEEELELTVKAIALNVEAGNREAAEINADVLRYTVEAATAAMAKRDPELAKKAAEIGAKALARAAEALAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6616
0.3573
0.1283
0.8424
0.9503
0.7529
0.305233
0.109644
44.93141
24.166201
0.327435
0.109644
69.860238
4.070689
0.744686
0.109644
0.109644
ok
null
amber-panda-ice
4
klima.jason-egfr_moxuu_0_27
egfr
null
0
null
23
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEAALAAELAAREAAAAAAAFAAEAAAILAKEDESILEILKKAVEVISKTNNNWPTSVVSFALVTLISLLLAAILGVDPLALGALDAAGQRQLADAFLAAAPILTYYDYSVRLLPAAWQFLHKQPELTARDIVELLKKGPEAIKEAYDKVGPIDVVWSGGNTDPATFSTDVSKEVLEEAQKLAEELLEEIEKVEEKRKKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.361
0.3283
0.125
0.9073
0.9743
0.8213
0.271995
0.110393
42.493497
24.74799
0.303206
0.110393
51.410083
16.846123
0.361391
0.110393
0.110393
ok
null
mellow-jaguar-ember
5
ccalia-conf14_125_2
egfr
null
0
null
18.7
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEAAAEVAEAIAKQLKTAVEAAKEDPEAGAAVAGIAALSARAAAKAFPEVKEQFEKLAKQAEEAARLLKEDPEKGIKKLEEAAKEAEKLAKELKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7337
0.3536
0.1301
0.8323
0.9435
0.7315
0.28524
0.107021
42.656322
24.96807
0.303083
0.107021
74.092868
2.481825
0.82461
0.107021
0.107021
ok
null
noble-crow-ash
6
x.rustamov-m_18_41
egfr
null
1
null
27.1
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SAGQAQIEEVKARADKAKTLEELKELRKEAYEKNWKAYMAVVDETEKKIAEAKATGKGDLDKISEEGNNALQANQNTYLEQWDIIDEKAKELRAAEEAAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7343
0.3522
0.1332
0.834
0.9452
0.7176
0.303116
0.104345
43.626762
24.420992
0.325508
0.104345
72.853627
3.434212
0.77084
0.104345
0.104345
ok
null
scarlet-otter-flint
7
klima.jason-egfr_7wmio_1_9
egfr
null
0
null
20.7
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SAAEEKKKHELLTEMAVKAQKAAYLTRLILSVEGNIWAREKGLKLVKVIVWSGGNTDVFTESEEESEKIRKELEDWLWEKYGEEIYRAQRLEFEVDKLMAEDKEIAEAVNSAAPETYYDYTYDDVARLLKYTGLWKEVSSISDDALKAPNNNNWPTVNPAQKEALDAALEVAEKHMEELKELAEKYLEEYERLKKEIEEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5921
0.3286
0.1352
0.8121
0.9546
0.7555
0.296491
0.119872
44.966865
24.588636
0.308062
0.119872
69.634095
7.379918
0.753354
0.119872
0.119872
ok
null
scarlet-ibis-clay
8
Razora712-sequence_2
egfr
null
1
null
23.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
RVKELEEEAKRKADEAEELKKRIDALQAKFNELLAAAKASSDPRKSYELFQQAMQYATEYLKAEEELEKLERERAELKDKAEQLAAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6991
0.348
0.1443
0.8277
0.9241
0.6744
0.298636
0.102237
42.652008
24.516124
0.316382
0.102237
71.689921
3.690047
0.723764
0.102237
0.102237
ok
null
steady-heron-bronze
9
joaosartori2-design8
egfr
null
0
null
72.8
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGVNINSYYIYWFRQAPGKEREFVSYISSSSGNTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAARYSSSSYYSSYSVDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3779
0.3522
0.1187
0.8853
0.9645
0.7864
0.265244
0.100864
41.023028
25.390888
0.285223
0.100864
50.258499
12.346725
0.472636
0.100864
0.100864
ok
null
scarlet-ant-fern
10
joaosartori2-design1
egfr
null
0
null
70
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGVNINSYYIYWFRQAPGKEREFVSYISGSSGNTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAARYSSSSSSSSYSVDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3794
0.3521
0.1158
0.8913
0.9723
0.8332
0.268415
0.099606
42.787711
25.187785
0.288837
0.099606
50.135743
12.560929
0.474316
0.099606
0.099606
ok
null
swift-gecko-granite
11
cchallacombe-anti_1
egfr
null
0
null
71
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISLNGSNTGYADSVEGRFTISRDNAKNSVSLQMNSLRSEDTAVYYCAAHVGWDYHDVAEYYDYWGQGTQVTV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2963
0.3609
0.1252
0.9176
0.9696
0.8616
0.278577
0.104745
43.472198
24.978394
0.300256
0.104745
40.345518
16.537062
0.282674
0.104745
0.104745
ok
null
ivory-ant-snow
12
tobiasoverme-seq26
egfr
null
0
null
73.1
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRTFNDYDMDWFRQAPGKEREFVSGIRAYDDNTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAALTGHTTATGFTFDVWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3031
0.3624
0.1357
0.9102
0.9627
0.8137
0.283157
0.109207
45.014926
24.597175
0.307015
0.109207
41.75426
16.783748
0.280064
0.109207
0.109207
ok
null
rough-bat-vine
13
tobiasoverme-seq22
egfr
null
0
null
69.7
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRSISTYYIHWFRQAPGKEREFVSGISAGSVSIGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAVILGAQIDYLGLDTWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3329
0.3616
0.1285
0.903
0.9659
0.8351
0.26556
0.10596
42.053034
25.230149
0.285079
0.10596
42.642557
16.214414
0.288765
0.10596
0.10596
ok
null
amber-jaguar-ice
14
svs25-seq4
egfr
null
0
null
42.8
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
PNLPGCPPELAGVCPCHGRCVYDAATGSVSCVCSEGCSGPPCTTCDPSGPAAG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3083
0.3848
0.1254
0.9203
0.9557
0.7945
0.276182
0.098546
44.245538
24.949851
0.285286
0.098546
40.03512
14.213709
0.229291
0.098546
0.098546
ok
null
steady-crane-cloud
15
evarist.planet-FM_75_7_10
egfr
null
0
null
15.5
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MTLPPTALAQIEEIKKDPNYEVTLEMRGGRPVVIVYNKETGKVTVSHIVDGELVSETPFT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4668
0.3707
0.1204
0.8831
0.9452
0.7624
0.28213
0.102422
43.185711
24.8454
0.293193
0.102422
56.324989
5.571003
0.508427
0.102422
0.102422
ok
null
azure-tiger-pine
16
evarist.planet-FM_75_39
egfr
null
0
null
21.2
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MPPSPEAQAFIDAHLPNPNVVREQRIVNGRPVILVFDPETGHVVVLAEGPDELTAYGLPE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3513
0.3708
0.1326
0.8989
0.9457
0.7901
0.273443
0.099583
41.688685
24.995642
0.283714
0.099583
49.948614
7.556285
0.40853
0.099583
0.099583
ok
null
rapid-jaguar-crystal
17
jvogt4-hotspots_only_469_03
egfr
null
0
null
19.6
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
METLEKRLEELRKITEEKIEELKAEAEKHLAEAAALKAADPSATAEVNANIEAAKGAKETAEVLKELTEGLEKEAKARL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5691
0.3528
0.1375
0.8557
0.9353
0.7417
0.306895
0.10574
42.750893
24.375659
0.324184
0.10574
61.755814
5.838524
0.61429
0.10574
0.10574
ok
null
hollow-crane-granite
18
klima.jason-egfr_7wmio_1_30
egfr
null
0
null
24.1
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MAEEEERLRELRTRLAVAKARYAYLVRLILSAEGNIELRKLGAELAYVYVWSGGNTDVYTLDEEESEKLREKLTEWLWERYEEEIFEAQRAEAEVDRLMAEDPAIAEAVNGALPVTYYDYEMHPVAQLLEITGLIEEVSEIDKDALKAPNNNNWPTVDESQKEALDKALEVVEERMEELEERAERLREEAERLEREIREL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3655
0.3309
0.1269
0.9122
0.9701
0.8218
0.274334
0.112122
43.077009
24.541403
0.306567
0.112122
44.657265
20.866233
0.272265
0.112122
0.112122
ok
null
vast-bear-dust
19
evarist.planet-FM_75_7_16
egfr
null
0
null
23
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
LTLPPSAQAQIEQLKQNPNYELTLFLSGGRPVVEVYNKETGAVTYSHVVDGQLVSETPFT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4263
0.3748
0.1284
0.8796
0.9379
0.7381
0.289616
0.108004
42.824139
24.858401
0.301376
0.108004
53.932792
5.934637
0.465099
0.108004
0.108004
ok
null
small-lion-marble
20
Razora712-sequence_6
egfr
null
0
null
27.5
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
EALEEALKALKAEHAKKRKAIYDELLESHSNIADKVEKGEINKEEADKLFEESQKQRDEKLKAIEEEEKKALKEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.637
0.3485
0.1252
0.8608
0.9463
0.7405
0.297339
0.099183
43.834205
24.447317
0.313389
0.099183
64.232001
4.864544
0.607657
0.099183
0.099183
ok
null
scarlet-moth-opal
21
vratinsrivastava10-sequence_6
egfr
null
0
null
22
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
DQKVTELNKAALQYEAEAAEYRTKAKTYDELSKGSGGGLYSKKAADYRLKAAKYDMEADAKREEAKALQA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6398
0.354
0.1244
0.8616
0.9417
0.7769
0.291852
0.096678
44.700207
24.583607
0.306198
0.096678
66.469555
5.365161
0.612422
0.096678
0.096678
ok
null
rapid-crow-quartz
22
allongoldberg-17449’_33p/n(H)
egfr
null
0
null
16.9
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
DQEELAAIIFQLEALLLLLLLIFALLIKGLAGHQSWALLRWILKLIEKALQWICAALEQLLQQLQQAAPPAAEHIQRLLQQIQEQLQAILQKLAKIIEEICKKPPEPALRALIHKIAQQLAQLIEKLCEILQELAQQL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4746
0.3457
0.1089
0.8871
0.9852
0.7993
0.273965
0.099268
41.868519
24.776659
0.297094
0.099268
45.43662
16.076702
0.309773
0.099268
0.099268
ok
null
wild-jaguar-marble
23
vratinsrivastava10-sequence_5
egfr
null
0
null
30.3
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
DLELAERLAAQLPDADEALEALRTAVTAGNLVDGAAQVLALGAAAAYRTGDVNALVLANQASSHLIRAAD
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5807
0.369
0.1495
0.8371
0.9178
0.6858
0.28143
0.125197
39.843795
24.642804
0.2932
0.125197
62.267678
3.024323
0.681645
0.125197
0.125197
ok
null
silent-bee-maple
24
nasr.kaveh-ZistRayaneshDesign-01
egfr
null
0
null
21
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
AELQQKIKDATAKAIAAAKAGDSDGVVAASSDIVTYSIELGDYAAGYNALKEVMEAAKDNDPLALSIIRQMGKSLRLLAN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6398
0.3601
0.1226
0.8517
0.9443
0.7483
0.289959
0.105206
42.498496
24.953443
0.306002
0.105206
69.991668
2.963746
0.773585
0.105206
0.105206
ok
null
lunar-bear-leaf
25
eugene.valkov-rfdiff_design_6_38_dldesign_2_af2pred
egfr
null
0
null
25.4
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SVPDPREERLKRVVAEVFKDYPKSAQERVNGVFKVREGDPEARAIAELIRTLLESERKLLTAIAASEADSTAAAARIAEIDDVLAYLDELLA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4592
0.3591
0.1233
0.8785
0.9527
0.7781
0.270014
0.103827
40.909216
25.179473
0.285031
0.103827
60.629247
6.687717
0.59245
0.103827
0.103827
ok
null
dark-ant-ruby
26
jvogt4-hotspots_only_484_01
egfr
null
0
null
26.1
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
STPEAEAFEKKLAALEEEKAEDLIALINAQAEAMKAAKDGDEAAKLYKEYSAKADALVAEYAAKLAKLKAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6104
0.3578
0.1264
0.8632
0.9443
0.7279
0.280275
0.099079
41.82381
25.034143
0.293687
0.099079
67.062225
3.861573
0.674297
0.099079
0.099079
ok
null
hollow-seal-moss
27
svs25-seq5
egfr
null
0
null
46.8
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SNIPGCPESLKGYCKCCGKCVYNKKTKSVSCVCSKGCSGPPCTECSPAGPASG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3179
0.3815
0.1175
0.9269
0.9636
0.8102
0.283016
0.096233
46.005511
24.757471
0.292937
0.096233
46.20126
12.015553
0.267573
0.096233
0.096233
ok
null
young-seal-maple
28
n.shtil-binder_5
egfr
null
0
null
20
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SLSELIKKIQQVVETQKSEVDKFKAAKEAELKEQYEKQKAAVAEAPEEKRPELLAYVENKRLVAQSQITLENAIKQAEATDKAEAEQAQLKS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6389
0.3438
0.1344
0.8422
0.939
0.7207
0.281197
0.102518
43.947958
24.655897
0.29803
0.102518
68.485096
4.927456
0.639696
0.102518
0.102518
ok
null
mellow-eagle-wave
29
deepsatlow-design:0 n:0|mpnn:1.164|plddt:0.823|i_ptm:0.756|i_pae:15.687|rmsd:2.555
egfr
null
0
null
37.1
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SLKEKEEKLIEELEEELKKIKEEYEKKIKEYLEEGNIEKAEKLKEELKKIRKEKGDELIKELLQLHLET
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6046
0.3479
0.1327
0.8607
0.9386
0.7212
0.29312
0.101585
43.906481
24.431469
0.307114
0.101585
64.982848
4.248854
0.595988
0.101585
0.101585
ok
null
scarlet-panther-birch
30
alecl-Sequence8
egfr
null
0
null
46.3
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SKNIQCPESYEGFCKNEGTCLYLEKINKYACRCTTGWIGEHCELADLDYWLKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2998
0.3756
0.1394
0.907
0.9404
0.7793
0.292615
0.106477
43.022643
24.539023
0.302984
0.106477
38.459081
13.906564
0.227234
0.106477
0.106477
ok
null
steady-ant-bronze
31
coreyhowe99-egfr_binder2
egfr
null
0
null
26.1
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SKEEQIKELQEKIEKLDKEIEKEKKTGTQEDVNALQLIKDSYVRKLEALK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5823
0.3612
0.128
0.8762
0.9379
0.708
0.28846
0.096377
42.265701
24.937312
0.298347
0.096377
64.452823
3.425525
0.577085
0.096377
0.096377
ok
null
azure-vole-ice
32
chris.j.frank-GPU_3_Binder_81_seq_0_B_m
egfr
null
0
null
18.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEVKKKNPLTYEHIERAKRRAEEIEERVLENARRYVETGDEEALREAVRLSLIAHYAFGTDLTPIMEENAKYVEEAKKIPLPWEAADDAERQAFQQEILDLQFDLTLTEVALEEYSDPSKSEEEQEFAKFTQEVLEAAERAGEAAKEAARLAPVVAGLLKLLSQRRAANNAALLANAPAD
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5238
0.3325
0.1353
0.84
0.9575
0.7827
0.272137
0.1112
40.812731
25.08238
0.278874
0.1112
65.325847
8.776317
0.681631
0.1112
0.1112
ok
null
silent-crane-ivy
33
gabriong-design10
egfr
null
0
null
37.9
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SESQENLREGAENVADRLKAENPALTDKEVEKIVDEAINKGNELDQKLRG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3807
0.3704
0.1211
0.897
0.9437
0.7501
0.297618
0.102485
44.346588
24.407131
0.308072
0.102485
41.149207
9.937546
0.269675
0.102485
0.102485
ok
null
wild-swan-moss
34
ccalia-conf58_160_3
egfr
null
0
null
14.6
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SELGEEALNYAYLAIAYLQLAVGDSHNAEEYLKKAEEYAKKMIEKMKKFGTEEEAEKVKKLAEEALKIAKELIEKGRKKGITGKERQEYFDKLDAEAGKLLKAVEEAIKKAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7168
0.3429
0.1358
0.8196
0.941
0.692
0.294567
0.104245
43.25736
24.665205
0.31808
0.104245
75.568837
3.193014
0.828935
0.104245
0.104245
ok
null
deep-quail-ice
35
theraven-sequence50
egfr
null
0
null
21.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKLKAEELKKKAAEAKFKAAELLAKGDELYKEAPKSKEAADKAGEAYIKAFQAYAKSLEYEAHAKYLS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5819
0.3549
0.1325
0.852
0.9316
0.7063
0.274539
0.107541
41.462266
24.719004
0.285954
0.107541
60.358381
4.810316
0.58657
0.107541
0.107541
ok
null
hollow-otter-pearl
36
theraven-sequence24
egfr
null
0
null
20
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELKKKSAEAQAKSAEKLAKGDDLYKEAPKSKEAADKAGEAYIKAFESYARSLEYEAHAKTLS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5629
0.3558
0.1267
0.8608
0.9395
0.7058
0.276171
0.115961
41.802633
24.728405
0.288362
0.115961
59.918766
4.935589
0.591951
0.115961
0.115961
ok
null
bright-yak-flint
37
theraven-sequence10
egfr
null
0
null
19.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELKKKAAETKTKAATLLVKGDELYKEAPKSKERADKAGEAYIKAFEAYAKSLEYEAHAKALS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5718
0.3587
0.1263
0.8624
0.9417
0.7126
0.280221
0.102113
42.437622
24.745314
0.293121
0.102113
61.254792
5.279204
0.58937
0.102113
0.102113
ok
null
crimson-bear-fern
38
blyncha-sequence46
egfr
null
0
null
22.8
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELKKKAAEAKAKAAELLAKGDELYKEAPKSKEAADKAGEAYIKAFEAYAKSLEYEAHAKALS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6012
0.3558
0.1271
0.8606
0.9421
0.704
0.275257
0.101516
42.170921
24.684795
0.287866
0.101516
64.920685
4.033841
0.658599
0.101516
0.101516
ok
null
quiet-eagle-maple
39
jvogt4-hotspots_only_302_00
egfr
null
0
null
17.3
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEEKKKEEELEKEKEKFREELEKLKEELKKLEEEVKELEKRMEEIAEREEENSEKIREKLKKLKELFKEQVKLAEKAIKEAEKALKEGDEALEKAAKKLKEYLEKSLKISEEVRKLADEFEAWAEKHLDPETVAELRSILGRLEQISLDIHLIIASLESRVEKLVDKVKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7594
0.3282
0.1433
0.782
0.9462
0.7356
0.29093
0.111023
45.437767
24.562264
0.307188
0.111023
78.950631
3.645084
0.860752
0.111023
0.111023
ok
null
amber-lion-plume
40
zalavi-egfr_binder3
egfr
null
0
null
20.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEEAKELKEKAKEKLKEALEKAKEALKDAEKAAEILKKIPEAKEALELAKKAAELIKEAIKDLEAALKTEDPKEAAKLAEKAEKLLFEAAAYLISAAEILEELAKKNKEHKEELLEAQKLLLRAASNAGEAAVLAAEAAKLYKKAIELEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8485
0.3336
0.1393
0.7838
0.9474
0.7306
0.276855
0.108929
43.506738
24.704292
0.303221
0.108929
82.371427
2.733773
0.885062
0.108929
0.108929
ok
null
wild-falcon-iron
41
gabriong-design6
egfr
null
0
null
33.3
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SASMKNLELGAENVAKRLQAENPELSPEEVQKIVDEAIKKGKELDEKLKG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.419
0.3649
0.1249
0.8911
0.9407
0.7213
0.296015
0.09967
44.111075
24.440155
0.306501
0.09967
44.719559
8.356168
0.324512
0.09967
0.09967
ok
null
amber-eagle-flint
42
tim-silica_corpora_sampled_epitope_1_generated_variant_17_rank_6
egfr
null
0
null
72.2
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLVESGGGLVKPGGSLRLSCAASGFTSSSYAAAWFRQAPGKEREFVSAIWWGKTATYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAAVFRGANYDGGYEYDYWGQGTLVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2749
0.3621
0.1262
0.921
0.9689
0.8609
0.269275
0.104514
41.985958
25.213676
0.28926
0.104514
34.409125
19.565621
0.279145
0.104514
0.104514
ok
null
vast-shark-birch
43
ahmedsameh-y4
egfr
null
0
null
86.6
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLQESGGGLVQPGGSLRLSCAASGRTFSSYAMGWFRQAPGKQREFVAAIRWSGGYTYYTDSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCAATYLSSDYSRYALPQRPLDYDYWGQGTQVTVSSLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2791
0.3659
0.1248
0.9266
0.9714
0.8479
0.272037
0.103802
42.917235
24.973051
0.294262
0.103802
36.466284
19.442797
0.222658
0.103802
0.103802
ok
null
steady-bison-oak
44
ahmedsameh-s3
egfr
null
0
null
86.6
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLQESGGGLVQPGGSLRLSCAASGRTFSSYAMGWFRQAPGKQREFVAAIRWSGGYTYYTDSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCAATYLRSDYSRYALPQRPLDYDYWGQGTQVTVSSLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2904
0.3662
0.1222
0.9237
0.9729
0.852
0.279634
0.108196
43.261776
24.870572
0.30323
0.108196
35.091705
19.378081
0.238654
0.108196
0.108196
ok
null
swift-crane-cedar
45
ahmedsameh-yy2
egfr
null
1
null
84.6
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLQESGGGLVQPGGSLRLSCAASGRTFSSHAMGWFRQAPGKQREFVAAIRWSGGYTYYTDSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCAATYLSSDYSRYALPQRPLDYDYWGQGTQVTVSSLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2831
0.3653
0.124
0.9265
0.9724
0.8355
0.272837
0.106343
43.707973
24.914994
0.294946
0.106343
38.469634
18.778297
0.229384
0.106343
0.106343
ok
null
vast-bear-marble
46
Cetuximab_scFv
egfr
null
1
null
100
scFv
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAGGGGSGGGGSGGGGSDILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2801
0.3478
0.1296
0.9252
0.9787
0.8635
0.27177
0.117644
46.241768
24.660434
0.309566
0.117644
43.375865
21.032003
0.299511
0.117644
0.117644
ok
null
amber-deer-clay
47
tobiasoverme-seq18
egfr
null
0
null
70.5
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRPFSSYSMAWFRQAPGKEREFVSGVSGGSGYSGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAASGSRGISRASGQDRWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2953
0.3643
0.1308
0.9109
0.9636
0.8213
0.277436
0.10622
44.581831
24.909608
0.299006
0.10622
42.762757
17.132179
0.301067
0.10622
0.10622
ok
null
misty-bat-cypress
48
evarist.planet-FM_75_1_76
egfr
null
0
null
22.2
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
PELPPEVRAALEALLGEAPIQITLKQVGGDLVATAVSFETGKFAILRWSPEGLEVLARSE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.509
0.3711
0.1222
0.8797
0.9472
0.7701
0.306757
0.10332
42.919379
24.709149
0.320061
0.10332
59.066275
3.983727
0.59897
0.10332
0.10332
ok
null
young-hawk-pearl
49
svs25-seq3
egfr
null
0
null
35.1
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
PDLPGCPPELAGYCPCGGKCVYNAATNSVSCECSPGCSGPPCTLCDPSGPAAG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3361
0.3836
0.1303
0.9111
0.9505
0.7927
0.280514
0.098775
44.299228
24.892105
0.2901
0.098775
45.404214
12.304236
0.271262
0.098775
0.098775
ok
null
dark-moth-ember
50
v.tararina-binder_5
egfr
null
0
null
36.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
NLEKEKGLAARQAYTQALQDEILVILALEEAEKLPKEEVKKIIDAHFATIDALEALIEYSPLPAEDIAAHLERVAQQYKDIANEKKKKGYEEAAKLAEEVAARYLALAKRYRALA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6197
0.3589
0.2393
0.7806
0.889
0.5681
0.282701
0.106612
44.299529
24.664976
0.304177
0.106612
75.204404
3.576431
0.812021
0.106612
0.106612
ok
null
pale-orca-jade
51
mw88-9_SWAP_FULL_ENERGY3
egfr
null
0
null
10.4
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MWYSMFSFIFSKRKRKRFQTLQHSNYNKMDDIEDVTNTHQTTFSYLYEEEEEDHATNNQFVQMSFHEYYQHYNSAATARKYAKSMSAVEIAMIMDLDVTAHQSYDDEMLVIYWLWMEDMDAWTHWQWWVRWRKKKFMWIVTSTVTMIHWFNRRKLALARNRNRQIKWIHLFVDNQVANHNVQQHYYSHDLIFIILLEEVW
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3073
0.3451
0.1279
0.9256
0.9766
0.8566
0.280604
0.116574
46.134814
24.386213
0.314935
0.116574
46.976376
19.626638
0.320615
0.116574
0.116574
ok
null
small-tiger-fern
52
klima.jason-egfr_aehce_2_11
egfr
null
0
null
13.7
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MTAEELAALEEKRKNEQLSLEFEAKATPYYLETLVKGLEELLETLDEYGDEVPGIWSGGNTDKMNRSGALLRNLSAVAEVVGGVYVKVALLAGEKYVESLIELGGGTYYDYDAGKQADLILTAAEKIVELVGSEEAEKLKELAEKLAEKARELAKLIKSNNNWPTEVTEEVSEEEFREFLELMLELAKKMKEFLEKLEKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6617
0.3222
0.1502
0.7873
0.9487
0.7141
0.302979
0.116985
42.993749
25.181541
0.292094
0.116985
72.110499
6.282443
0.797805
0.116985
0.116985
ok
null
dark-bat-marble
53
nickboyd-Dual_Seq1
egfr
null
0
null
44.7
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSYEEIAERLVKELGASRADALAAARASGGDLEEAEKLVKLPL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4885
0.379
0.125
0.8816
0.9329
0.7453
0.293943
0.107377
43.554406
24.688242
0.302613
0.107377
56.128032
3.563444
0.552893
0.107377
0.107377
ok
null
ivory-orca-ice
54
tadej.satler-8C0N
egfr
null
0
null
28.9
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSLEEKIREISLQALLNGEPISGLLLYIRDLYKKDKEEAKKYVEYLYKEFKNELFKEVLELMEKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5389
0.36
0.1305
0.8552
0.9255
0.707
0.298124
0.142243
42.591165
24.781009
0.310749
0.142243
66.313193
3.158757
0.672328
0.142243
0.142243
ok
null
silent-bison-onyx
55
nickboyd-Domain1_Seq5
egfr
null
0
null
44.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSIEETAKKIKEELGVSEEVARAAAIQAGGDYELAKELAKSLA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5288
0.3761
0.1264
0.8797
0.9331
0.7333
0.293434
0.102949
42.731623
24.939746
0.302359
0.102949
62.918452
2.65231
0.603114
0.102949
0.102949
ok
null
bright-falcon-marble
56
nickboyd-Domain1_Seq1
egfr
null
0
null
50
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSAAEIAEEIKKELKCSSEVAGEAVVESGGDYEKALELAKKKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5178
0.3757
0.1158
0.8961
0.9501
0.805
0.297808
0.102611
44.056117
24.519733
0.306827
0.102611
57.050739
3.179271
0.526527
0.102611
0.102611
ok
null
lunar-mole-reed
57
x.rustamov-s_15_28
egfr
null
0
null
19.4
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MKEKLNELADEAISFAKSIFGDHPSLATFTSFANSVADDLSKEDISDEEALNYYVQIVHLQLLKLLLEYAPENPNMNFRQAQAIAEEMYTKLSKKAKELL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7116
0.3521
0.1336
0.8288
0.9403
0.72
0.293287
0.106071
40.732696
24.891872
0.313441
0.106071
72.614479
3.217655
0.808353
0.106071
0.106071
ok
null
deep-yak-rose
58
nickboyd-Domain2_Seq3
egfr
null
0
null
46.1
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MDYSEIADKLVEELGVERLVALEAAREAGGDLEKAKELAKKRL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5082
0.3701
0.1242
0.8826
0.935
0.7484
0.307437
0.099809
44.885989
24.276241
0.317172
0.099809
62.021169
2.968832
0.557754
0.099809
0.099809
ok
null
hollow-goat-jade
59
chris.j.frank-GPU_0_Binder_106_seq_2_B_m
egfr
null
0
null
13.9
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MAAEKLQKIEDYAKNAETPEGKELLLKGYAGVGLSLLYLKYAYEYGEDKAKLARAVFEAAKKLYEVAKKEYEKYKDTDKKKAFLAEYAIYEVGYEFMKLLPSLLESFKELPADELKEVVKFGKEMIEFTVEFVRRAETDPLLKELPELPEPPPLEEVEKKAEEAKKSIEELEKEAKKKEA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7148
0.3338
0.1357
0.7961
0.958
0.7765
0.291903
0.110687
43.221007
24.906231
0.298901
0.110687
77.884826
5.037573
0.823968
0.110687
0.110687
ok
null
brisk-heron-maple
60
allongoldberg-8714_32po(S)_34hp(L)
egfr
null
0
null
15.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
LAQAVQQLLIEIILLILIIIWLLALLALFLASNLKLAFLAWLLKAIQQYVQILCKIVEALLQKIKKDPFPAAQHLEQLVAQLLQQIQELLQRIAQLVKQICQTPAPAALQQLVEELAQALAQLLQEIAQLVQQLCQEV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5183
0.3484
0.1109
0.8756
0.9799
0.7959
0.263108
0.093269
40.519282
25.053939
0.285381
0.093269
51.244214
11.63101
0.391121
0.093269
0.093269
ok
null
jade-eagle-ivy
61
eugene.valkov-rfdiff_design_88_34_dldesign_1_af2pred
egfr
null
0
null
25.3
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
KLEEIKKKQELANKLAAEDEIMWDIQVLLLELEAEGVSEEEKDKILEEYIESQPEELKEKAKEYLELALYIKENEELVKEEEY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.633
0.3638
0.1333
0.8507
0.9408
0.7145
0.288693
0.12419
43.627779
24.579634
0.305415
0.12419
68.21091
3.643214
0.730708
0.12419
0.12419
ok
null
vast-shark-frost
62
Razora712-sequence_3
egfr
null
0
null
22.5
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
KELEEARKKLKEEIIKEKKAIVDQELKNHAEIADLVEAGKINEKEARELQKENEKKAEEQREAIDKKAAEREKEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5137
0.3465
0.1304
0.8889
0.9443
0.7249
0.299745
0.094262
44.554098
24.102412
0.315631
0.094262
44.795671
17.26433
0.271292
0.094262
0.094262
ok
null
radiant-mole-sand
63
alex.naka-65bf78
egfr
null
0
null
48.7
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
ISYSACPLSYDGVCGNGGVCKHALSLDSDTCQCVWDYMGDRVQTEDLRYT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2689
0.3822
0.1511
0.9049
0.9369
0.784
0.292423
0.115102
43.611573
24.690609
0.302099
0.115102
31.390876
15.499353
0.1746
0.115102
0.115102
ok
null
dark-gecko-cedar
64
aqamar-seq5
egfr
null
0
null
21.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
GSAALKAAAKAVKAAAKALAEKLLQKSLDLLIEAGENPEKAPELKEQAAEYSSLAALVLTLGDKLAAALEKLA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6034
0.3611
0.1278
0.8586
0.9412
0.7729
0.308143
0.098264
43.157366
24.439786
0.324785
0.098264
65.281288
4.077369
0.643311
0.098264
0.098264
ok
null
misty-cat-iron
65
akshayc-9_run_3_1002_dldesign_0_cycle1_af2pred
egfr
null
0
null
13.6
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
GISESLAMLEFLKKLAEALAPLTKIEEEAEKELKEKIKELVPEGSEEVYEEILRDADKVRTAASDAASLEAEGGDYKAEQDYLDTLKAESIKKIEEKYGKEVADLAKKYFDIKAKIGYEEGKIAVELEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6908
0.3427
0.1374
0.8213
0.9448
0.7473
0.287523
0.106522
42.183778
24.71022
0.31302
0.106522
72.573741
4.739874
0.787967
0.106522
0.106522
ok
null
rapid-heron-cedar
66
akshayc-5_run_3_1002_dldesign_0_cycle1_af2pred
egfr
null
0
null
15.7
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
GISESLAKLEFIKKLAEALAPLTEKAAAAEKKLAAAIKKLVPENAEEVTEEILAGADKVRVAASNAAYLAETGGDAQAEAAYTKEVKAEKLKEIEKKYGPEVAKLAKEYFDLQAELGAQEGKLVAKLEKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.678
0.3449
0.1304
0.8257
0.9495
0.7737
0.287815
0.110678
42.456984
24.739439
0.313184
0.110678
73.346971
4.545629
0.789931
0.110678
0.110678
ok
null
strong-deer-ruby
67
carlos.bueno-WWB11
egfr
null
0
null
18.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
FFDARAWKRDYSKKQQDQTQYSIEFWFWFEELLLVVIIHRHSHMVIVLEWLDDTMSHMQTKVYMTMDWSRYTMTATQAQKNLNMWMIVLFLIFEFIEYWYTRLAMAMSVLLYYLVFEDWEQAKNSQAAAKAKHQHYHVNWNNWNSWDRNEWKNNNNQQHHHTRSHKAKVYEYMVIDTDDRRRSRYIVTEDFFIFIEISTM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3354
0.3363
0.1229
0.936
0.9795
0.8135
0.276724
0.107296
44.216017
24.61477
0.308847
0.107296
52.188245
17.02734
0.37144
0.107296
0.107296
ok
null
golden-swan-cypress
68
tim-silica_corpora_sampled_epitope_0_generated_variant_7_rank_4
egfr
null
0
null
74.7
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
EVQLVESGGGLVQPGGSLRLSCAASGFTSSNNPMGWFRQAPGKGRELVAAISQSGASTNYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAAGVRATDDCFDVTSTTYDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2801
0.3662
0.1252
0.9251
0.9696
0.8295
0.275647
0.108858
43.866867
24.944211
0.297338
0.108858
39.861536
18.32704
0.280964
0.108858
0.108858
ok
null
strong-falcon-plume
69
tim-silica_corpora_sampled_epitope_0_generated_variant_10_rank_8
egfr
null
0
null
75.7
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
EVQLLESGGGEVQPGGSLRLSCAASGSTFSNYGMGWFRQAPGKEREFVSAISWSGDTVYYAESVKGRFTISRDNAKNTLYLQMSSLRAEDTAVYYCAVTIRAETSYSEEYDYWGQGTLVTVKPG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.301
0.3568
0.1189
0.9174
0.9722
0.8493
0.276939
0.102763
42.791102
24.962091
0.298766
0.102763
44.465008
15.212219
0.348192
0.102763
0.102763
ok
null
pale-gecko-orchid
70
rajat-3_run_2_1111_0001_dldesign_0_cycle1_af2pred
egfr
null
0
null
34.2
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
EEEEKKKKEEEEKKKELDEKMAEEAKKAVEAAAKGDLAAADAHLGKIAELIAEEN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5662
0.367
0.1254
0.8762
0.9401
0.7333
0.29757
0.103389
44.035622
24.432631
0.309141
0.103389
59.291895
4.327736
0.540095
0.103389
0.103389
ok
null
misty-yak-ember
71
aqamar-seq2
egfr
null
0
null
21.5
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
EEARKEALEAAYKEAAGEALKAEAEAVVYENEARATGSPELAAKAEAARAKAKEAWAKAEALKAQLA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6281
0.3646
0.1308
0.8607
0.9395
0.714
0.296668
0.097938
42.279016
24.541043
0.310886
0.097938
63.425637
4.588422
0.598875
0.097938
0.097938
ok
null
strong-bee-ash
72
mw88-10_SWAP_FOLDING_E3
egfr
null
0
null
14.2
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
DILLLLVKNKWDYTEFESFVILLLYSQSIGTNIVIILYKQKNHIRIAFKYADESIDGVEWFMVMMMTGTDLAIIHWNWKQQTEYELMILQNNNWPTTIIAQSHDHHMHLSITCTVSGYDEYHEDDDWVRQSPGKDAKRKNRRYRTRKRTATQNKRRDENVSMDNSKSQVFFKMFFWSRQDKSHWFWFWVLTYYDYEFAFM
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2955
0.3447
0.1252
0.9287
0.9786
0.8571
0.2663
0.107975
42.584552
24.894446
0.296465
0.107975
39.476933
22.501662
0.266001
0.107975
0.107975
ok
null
strong-quail-jade
73
x.rustamov-m_3_33
egfr
null
1
null
29.4
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
DEEFRKKSHEVNQNYSDQILNLSTDIIETLEKVAKEAGLEDLADNNLIPDSIPDDGNPGHKKLKEKAKEETDYFYEQSNAIKKQFDKDRAKVEAEAAAAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4231
0.3464
0.1172
0.8973
0.9572
0.7661
0.324048
0.103972
42.944493
23.582611
0.348085
0.103972
39.506511
17.168482
0.289127
0.103972
0.103972
ok
null
jade-vole-lotus
74
vratinsrivastava10-sequence_9
egfr
null
0
null
22.3
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
ATAAKKAQLEAEAAKKEAEAAEAKAKAKQVEDDAAKKLAELDVAAGQAASTEEGPAISNAKEKEAETVKAEADAKKAKLAAQAADLKAQAAQYKQQAAAL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7203
0.3504
0.1266
0.8479
0.952
0.7677
0.299852
0.096503
46.397513
24.276473
0.321516
0.096503
76.736473
5.524062
0.676423
0.096503
0.096503
ok
null
azure-shark-frost
75
zalavi-egfr_binder7
egfr
null
0
null
19.5
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
AQAAAKETIRAVLKAAAEAARKMAEEARKLAKELEKYNKEAAKHALKAAEYLEKAAELYEKAAEAVDNSKEVWRLVTEAQFAALNAAYELEKAAELTTEELAKKAKELAKEVIDTGNTAMTETAAAIASG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7799
0.3456
0.133
0.8023
0.9458
0.7296
0.284237
0.1068
42.509137
24.933934
0.309864
0.1068
78.882898
2.943688
0.859827
0.1068
0.1068
ok
null
rapid-dove-orchid
76
freddie.martin-FJOM_8
egfr
null
0
null
21.4
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
AKEQLKANAKETEELLNKANDALIDLARRVAEADGLVGSHLYLFALAFTAFADSLTNALLAYADGDVAAMQEHCRKAAQALRAAAEEVRAMARASGHEELGAEAVAALEAAAAHLEAAAADPSAFLEHLAAALEEIGRALRLVAELAGAASGDAAFAAAVKAAIEENVKAALEKIKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7501
0.3374
0.1517
0.7657
0.9387
0.7216
0.395042
0.113331
39.633479
20.767966
0.452825
0.113331
80.286938
3.342467
0.863824
0.113331
0.113331
ok
null
lunar-heron-maple
77
nasr.kaveh-ZistRayaneshDesign-07
egfr
null
0
null
23.4
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
AALKAKVEALVDKAIAAAKAGDFDAALKYAEDALLAAEAAGDGELAEEAVKRIIEAVPSLPQYYKDLLRAFAERVKSKAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6554
0.3622
0.1227
0.8536
0.9463
0.7437
0.283755
0.102829
43.683744
24.784601
0.299228
0.102829
72.779944
3.009299
0.745844
0.102829
0.102829
ok
null
wild-ant-fern
78
ccalia-conf94_139_2
egfr
null
0
null
27.7
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
AALEAAKKALEAAKKALAELKAAAKEAEKVNPGAGALANTMAEAVEKILKVGEEALKDPSQAENAEAVFKLAKGVAEDAIKSTKARIKKAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7167
0.3551
0.1274
0.8422
0.9486
0.7382
0.304479
0.10319
42.478197
24.561562
0.324815
0.10319
74.972264
2.570845
0.829549
0.10319
0.10319
ok
null
brisk-kiwi-vine
79
ahmedsameh-Q3
egfr
null
1
null
85.5
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
WVQLQESGGGLVQPGGSLRLSCAASGRTFSSYAMGWFRQAPGKQREFVAAIRWSGGYTYYTDSVKGRFTISRDNAKTTVYLQMNSLKPEDTAVYYCAATYLSSDYSRYALPQRPLDYDYWGQGTQVTVSSLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2865
0.3645
0.1245
0.9239
0.9719
0.8436
0.268156
0.1055
41.758576
25.226184
0.28915
0.1055
36.983693
18.761262
0.229891
0.1055
0.1055
ok
null
small-crane-flint
80
tadej.satler-1PZ2
egfr
null
0
null
27.1
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SSSEEIKKLLEELKKELEKEKTVTEKKKLIVEAILKLHTLGTEEAEKKAKELEKELLEMK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.554
0.3583
0.1273
0.8759
0.9422
0.7059
0.292852
0.096287
43.867833
24.454231
0.305115
0.096287
62.76031
3.855901
0.631119
0.096287
0.096287
ok
null
mellow-bison-birch
81
n.shtil-binder_1
egfr
null
0
null
31.3
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SMEKALGREAAEAYTQTLLHRIKVLLALENASELPKEEVKAIVDEHFALVDKLKELIEYSPLSAEDIAEEFNKWADDYNDIAEEKEKKGYKEEAAFAKEVADRYRAKADEFKALA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7355
0.3432
0.1291
0.818
0.9436
0.7658
0.28174
0.107724
43.709668
24.793754
0.302669
0.107724
74.482419
3.673199
0.796692
0.107724
0.107724
ok
null
scarlet-deer-opal
82
coreyhowe99-egfr_binder1
egfr
null
0
null
28.2
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SELEEKAKETIEKANALKEEAKTAEDKEAVIAKYQEAINEFFELVKEIFD
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5203
0.3587
0.1267
0.8836
0.9408
0.7212
0.294232
0.09542
41.724942
24.763792
0.304645
0.09542
55.432508
4.474847
0.511075
0.09542
0.09542
ok
null
solid-mole-onyx
83
tadej.satler-5HT6op
egfr
null
0
null
32.2
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEGELLGKELEADYLASQAPKVNKATQLTIAEELERLIKELEALGADPARLAEYRALVEQLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3941
0.3662
0.1294
0.8946
0.9411
0.7337
0.310542
0.102477
42.488216
24.380355
0.324439
0.102477
46.779245
13.365119
0.381993
0.102477
0.102477
ok
null
lunar-goat-cloud
84
theraven-sequence45
egfr
null
0
null
25
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEETKAKAEELKTKAAEAKYKHAELLAKGDELYKEAPKSKEAADKAGEAYIKAFEFYAKSLEYRAHYEALS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5627
0.3601
0.126
0.8619
0.9423
0.7133
0.310479
0.101344
42.267283
24.51558
0.326726
0.101344
63.572378
4.13612
0.636074
0.101344
0.101344
ok
null
calm-crow-lava
85
rjtpunia-5_run_2_1162_0001_dldesign_0_cycle1_af2pred
egfr
null
0
null
23.1
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SEEEARRHALEQLAAVQEQLAALGKEADKISDAAYKEAEPIVKELTEKEIAKKNLTPEEAAKFKAIGEEETVSLAAGIANAIANGKETGTGAADKAAALASLKERFKEY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5814
0.3465
0.1235
0.8571
0.9508
0.7798
0.292359
0.110947
42.483799
24.617095
0.314251
0.110947
61.853415
8.43082
0.616922
0.110947
0.110947
ok
null
green-goat-willow
86
v.tararina-binder_3
egfr
null
0
null
19.7
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SDAAAAAKAARKAKIDSLIKEQLDKVVEVDKKIEELRKKVEEEKLGAKPEEREKLERLYEEKVKELQEELDKDLAEQKAKIIELAS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5969
0.3519
0.1311
0.8563
0.9447
0.7532
0.306176
0.100098
43.778933
24.426386
0.325369
0.100098
69.01242
4.843468
0.655471
0.100098
0.100098
ok
null
golden-bison-orchid
87
surabhi.lata-Design_09
egfr
null
0
null
26.6
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
SAEDLEKALEAAEKALEAAEKALKAIKAGDADKAKEYLLEATAYLLEAVAHLARDPALAALAREVDALADEAVKLFQAAIDLLEAGGDKKEAIALAEKGLAKVKEILKRIEKAAKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7701
0.3527
0.1316
0.8151
0.9453
0.7579
0.285426
0.105932
44.463914
24.770441
0.307427
0.105932
80.223477
2.457119
0.860803
0.105932
0.105932
ok
null
noble-bear-fern
88
tim-silica_corpora_sampled_epitope_1_generated_variant_15_rank_3
egfr
null
0
null
71.4
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLVESGGGLVKPGGSLRLSCAASGSTSSNYAAAWFRQAPGKEREFVSAISWGKTATYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAAVFRIGTWDASYEYDYWGQGTLVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.275
0.362
0.1236
0.9257
0.9724
0.8604
0.27132
0.101895
42.653918
25.014857
0.291895
0.101895
32.337273
20.982186
0.156576
0.101895
0.101895
ok
null
golden-kiwi-sand
89
tim-silica_corpora_sampled_epitope_6_generated_variant_18_rank_10
egfr
null
1
null
71
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVQLVESGGGLVKPGGSLRLSCAASGGTSSSYAAAWFRQAPGKEREFVSAISSGKTATYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAAVFRTLLYGTLYEYDYWGQGTLVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2942
0.3611
0.1263
0.9184
0.9686
0.8418
0.270353
0.10859
43.32453
25.123597
0.290386
0.10859
38.489722
18.271315
0.255935
0.10859
0.10859
ok
null
steady-quail-opal
90
joaosartori2-design7
egfr
null
0
null
75.4
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGVNINSYYIYWFRQAPGKEREFVSYISSSSGNTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAARYSSSSSSSSYTVDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3781
0.354
0.1167
0.8915
0.972
0.8271
0.291514
0.099923
45.281286
24.537822
0.316846
0.099923
49.298697
13.428167
0.424938
0.099923
0.099923
ok
null
calm-panda-pine
91
joaosartori2-design5
egfr
null
0
null
63.6
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGVNINSYYIYWFRQAPGKEREFVSYISGSSGNSGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAARYYSSSYYSSYYVDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3876
0.3561
0.1212
0.8819
0.9623
0.7732
0.262819
0.103145
39.630902
25.058136
0.280869
0.103145
41.38937
14.848555
0.389403
0.103145
0.103145
ok
null
radiant-orca-cypress
92
joaosartori2-design4
egfr
null
0
null
73.6
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGVNINSYYIYWFRQAPGKEREFVSYISGSGSNAGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAARYSSSSYYSSYSVDYWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3765
0.3533
0.118
0.8862
0.9646
0.7807
0.259987
0.100749
42.367765
25.165291
0.279079
0.100749
48.41133
13.263478
0.459122
0.100749
0.100749
ok
null
calm-ibis-wave
93
tobiasoverme-seq20
egfr
null
0
null
69.4
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRTLDRYFIEWFRQAPGKEREFVSGRRESPSEGGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAQYASRGYVYCIFQITGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3251
0.3654
0.1241
0.9073
0.9679
0.8123
0.275379
0.103489
43.43841
24.958813
0.297369
0.103489
45.283328
14.707408
0.368238
0.103489
0.103489
ok
null
gentle-ant-lotus
94
tobiasoverme-seq19
egfr
null
0
null
64.4
Nanobody
true
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
QVKLEESGGGSVQTGGSLRLTCAASGRSITSYGTNWFRQAPGKEREFVSGIETWSGNTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAASILCGACYARDLNTWGQGTQVTVSS
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3429
0.3575
0.1252
0.8981
0.9662
0.8409
0.281209
0.102603
44.122442
24.776154
0.303908
0.102603
48.017122
13.485702
0.359823
0.102603
0.102603
ok
null
dark-dove-vine
95
alex.naka-e50198
egfr
null
0
null
42.8
Peptide
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
PKFSACCSNYDGVCCNGGVCHLAEELTSYTCQCIIGYSGDRVQTFDLRYT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.2721
0.375
0.1465
0.9104
0.9432
0.7884
0.279472
0.10824
42.5737
25.003789
0.288351
0.10824
33.912655
13.09686
0.202554
0.10824
0.10824
ok
null
shy-mole-ivy
96
klima.jason-egfr_aehce_2_20
egfr
null
0
null
13.2
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MTEEELEEIEKKRELEQQSLLYEAKRTPYVLRTLVKGLKELLENLDSYGDTIPAIWSGGNTDTMDLSGMLLGNLSALAEVVGGFLVYVELLAGKEYVKSAIELGGGTYYDYDATAQAKLIRTVAERVVELYGSEEAEELRELALKVAEMAEELGKLIKSNNNWPTEFKEKVSREEGREILRLLAELAEKMLRFLEKLEAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4195
0.3294
0.1342
0.8644
0.9588
0.7751
0.276119
0.115864
44.244912
24.600695
0.311492
0.115864
55.76199
13.290326
0.541825
0.115864
0.115864
ok
null
deep-crane-pine
97
nickboyd-Domain2_Seq1
egfr
null
0
null
38.8
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSYEEIAEKLVKEYGVSRRTALAAARSSGGDLEEAKKLALLPE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5082
0.3758
0.1239
0.8853
0.9376
0.7429
0.299183
0.100125
44.437118
24.398536
0.308137
0.100125
57.770077
3.325705
0.564194
0.100125
0.100125
ok
null
rapid-eagle-ivy
98
nickboyd-Domain1_Seq2
egfr
null
0
null
44.7
Miniprotein
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MSAAEIAEEIKKKLNVSSELAGQAVIESGGDLEKALEIAKKKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.488
0.3764
0.1196
0.8881
0.9397
0.7692
0.298765
0.102256
43.557214
24.529189
0.307788
0.102256
58.136604
3.112365
0.535324
0.102256
0.102256
ok
null
small-ram-plume
99
x.rustamov-s_11_5
egfr
null
0
null
15.1
Other
false
LEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGE...
MPELEAFKEEFEKFMKEFKKLSEEDIKDFKENLKKKGKPVTEEDIEKKKKEIEDTAKDIADLYVHNFGLLARYIAKRTGAPEEVAEKLTEEFKEIALSLI
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.598
0.3443
0.1282
0.8462
0.944
0.7079
0.302319
0.104515
42.078428
24.619687
0.324181
0.104515
67.884328
4.349261
0.694918
0.104515
0.104515
ok
null
End of preview. Expand in Data Studio

proteinbase: AlphaFold2 + AlphaFold3 metrics

Per-design AlphaFold2 and AlphaFold3 confidence metrics for the binder–target pairs in yk0/proteinbase_interactions. The source dataset provides sequences only (no structures); these metrics were produced by predicting/scoring each complex from sequence.

2346 rows, one per binder–target pair (2346 scored ok).

How the metrics were computed

  1. Target structure — each unique target sequence was folded once with AF2 monomer (ColabDesign hallucination protocol) to obtain a target template.
  2. AF2 metrics (af2_*) — de novo AF2-Multimer (ColabDesign binder protocol, single model model_1_multimer_v3, 3 recycles, no MSA, no initial guess): the templated target + the binder sequence are folded into a complex, and confidence metrics are read out.
  3. AF3 metrics (af3_*) — AF3Score run on the AF2-predicted complex, conditioned on those coordinates (init_guess=true, no MSA). These are AF3's confidence in the AF2 structure, not an independent de-novo AF3 prediction.

Columns

  • Metadata / labels carried over from the source dataset: proteinbase_id, binder_name, target, binding_strength, label, value, max_similarity_to_any_database, design_class, antibody, target_sequence, binder_sequence
  • label — binary experimental binding label (1 = binder, 0 = non-binder).
  • AF2 (model_1_multimer_v3): af2_complex_plddt, af2_ptm, af2_iptm, af2_pae, af2_ipae, af2_min_ipae (note: af2_complex_plddt/af2_iptm etc. are on a 0–1 scale; PAE values are normalised as in ColabDesign).
  • AF3: af3_ptm, af3_iptm, af3_chain_A_plddt, af3_chain_A_pae, af3_chain_A_ptm, af3_chain_A_iptm, af3_chain_B_plddt, af3_chain_B_pae, af3_chain_B_ptm, af3_chain_B_iptm, af3_iptm_A_B (note: AF3 pLDDT is 0–100; af3_chain_B_* = binder chain; the per-chain iptm fields equal af3_iptm for a 2-chain complex).
  • status, error.

Important caveats

  • These are de-novo predictions from sequence, not refolds of designed structures, so confidence values are markedly lower than initial-guess pipelines (e.g. Proteina-Complexa evals) and are not directly comparable to them in absolute terms.
  • The target template is an AF2-predicted monomer, so target-fold error propagates into every complex for that target.
  • As classifiers of the experimental label, the metrics are weak-to-modest (binder pLDDT is the most predictive; AUC ~0.60–0.68 on litscrape, lower on proteinbase). AF3 closely tracks AF2 and adds little.
Downloads last month
32